webdataset.autodecode

Automatically decode webdataset samples.

View Source
#
# Copyright (c) 2017-2021 NVIDIA CORPORATION. All rights reserved.
# This file is part of the WebDataset library.
# See the LICENSE file for licensing terms (BSD-style).
#

"""Automatically decode webdataset samples."""

import io
import json
import os
import pickle
import re
import tempfile
from functools import partial

import numpy as np

from .checks import checkmember, checknotnone


"""Extensions passed on to the image decoder."""
image_extensions = "jpg jpeg png ppm pgm pbm pnm".split()


################################################################
# handle basic datatypes
################################################################


def torch_loads(data):
    """Load data using torch.loads, importing torch only if needed.

    :param data: data to be decoded
    """
    import io
    import torch

    stream = io.BytesIO(data)
    return torch.load(stream)


def basichandlers(key, data):
    """Handle basic file decoding.

    This function is usually part of the post= decoders.
    This handles the following forms of decoding:

    - txt -> unicode string
    - cls cls2 class count index inx id -> int
    - json jsn -> JSON decoding
    - pyd pickle -> pickle decoding
    - pth -> torch.loads
    - ten tenbin -> fast tensor loading
    - mp messagepack msg -> messagepack decoding
    - npy -> Python NPY decoding

    :param key: file name extension
    :param data: binary data to be decoded
    """
    extension = re.sub(r".*[.]", "", key)

    if extension in "txt text transcript":
        return data.decode("utf-8")

    if extension in "cls cls2 class count index inx id".split():
        try:
            return int(data)
        except ValueError:
            return None

    if extension in "json jsn":
        return json.loads(data)

    if extension in "pyd pickle".split():
        return pickle.loads(data)

    if extension in "pth".split():
        return torch_loads(data)

    if extension in "ten tb".split():
        from . import tenbin

        return tenbin.decode_buffer(data)

    if extension in "mp msgpack msg".split():
        import msgpack

        return msgpack.unpackb(data)

    if extension in "npy".split():
        import numpy.lib.format

        stream = io.BytesIO(data)
        return numpy.lib.format.read_array(stream)


################################################################
# Generic extension handler.
################################################################

def call_extension_handler(key, data, f, extensions):
    """Call the function f with the given data if the key matches the extensions.

    :param key: actual key found in the sample
    :param data: binary data
    :param f: decoder function
    :param extensions: list of matching extensions
    """
    extension = key.lower().split(".")
    for target in extensions:
        target = target.split(".")
        if len(target) > len(extension):
            continue
        if extension[-len(target):] == target:
            return f(data)
    return None


def handle_extension(extensions, f):
    """Return a decoder function for the list of extensions.

    Extensions can be a space separated list of extensions.
    Extensions can contain dots, in which case the corresponding number
    of extension components must be present in the key given to f.
    Comparisons are case insensitive.

    Examples:
    handle_extension("jpg jpeg", my_decode_jpg)  # invoked for any file.jpg
    handle_extension("seg.jpg", special_case_jpg)  # invoked only for file.seg.jpg
    """
    extensions = extensions.lower().split()
    return partial(call_extension_handler, f=f, extensions=extensions)


################################################################
# handle images
################################################################

imagespecs = {
    "l8": ("numpy", "uint8", "l"),
    "rgb8": ("numpy", "uint8", "rgb"),
    "rgba8": ("numpy", "uint8", "rgba"),
    "l": ("numpy", "float", "l"),
    "rgb": ("numpy", "float", "rgb"),
    "rgba": ("numpy", "float", "rgba"),
    "torchl8": ("torch", "uint8", "l"),
    "torchrgb8": ("torch", "uint8", "rgb"),
    "torchrgba8": ("torch", "uint8", "rgba"),
    "torchl": ("torch", "float", "l"),
    "torchrgb": ("torch", "float", "rgb"),
    "torch": ("torch", "float", "rgb"),
    "torchrgba": ("torch", "float", "rgba"),
    "pill": ("pil", None, "l"),
    "pil": ("pil", None, "rgb"),
    "pilrgb": ("pil", None, "rgb"),
    "pilrgba": ("pil", None, "rgba"),
}


class ImageHandler:
    """Decode image data using the given `imagespec`.

    The `imagespec` specifies whether the image is decoded
    to numpy/torch/pi, decoded to uint8/float, and decoded
    to l/rgb/rgba:

    - l8: numpy uint8 l
    - rgb8: numpy uint8 rgb
    - rgba8: numpy uint8 rgba
    - l: numpy float l
    - rgb: numpy float rgb
    - rgba: numpy float rgba
    - torchl8: torch uint8 l
    - torchrgb8: torch uint8 rgb
    - torchrgba8: torch uint8 rgba
    - torchl: torch float l
    - torchrgb: torch float rgb
    - torch: torch float rgb
    - torchrgba: torch float rgba
    - pill: pil None l
    - pil: pil None rgb
    - pilrgb: pil None rgb
    - pilrgba: pil None rgba

    """

    def __init__(self, imagespec, extensions=image_extensions):
        """Create an image handler.

        :param imagespec: short string indicating the type of decoding
        :param extensions: list of extensions the image handler is invoked for
        """
        checkmember(imagespec, list(imagespecs.keys()), "unknown image specification")
        self.imagespec = imagespec.lower()
        self.extensions = extensions

    def __call__(self, key, data):
        """Perform image decoding.

        :param key: file name extension
        :param data: binary data
        """
        import PIL.Image

        extension = re.sub(r".*[.]", "", key)
        if extension.lower() not in self.extensions:
            return None
        imagespec = self.imagespec
        atype, etype, mode = imagespecs[imagespec]
        with io.BytesIO(data) as stream:
            img = PIL.Image.open(stream)
            img.load()
            img = img.convert(mode.upper())
        if atype == "pil":
            return img
        elif atype == "numpy":
            result = np.asarray(img)
            checkmember(result.dtype, [np.uint8])
            if etype == "uint8":
                return result
            else:
                return result.astype("f") / 255.0
        elif atype == "torch":
            import torch

            result = np.asarray(img)
            checkmember(result.dtype, [np.uint8])
            if etype == "uint8":
                result = np.array(result.transpose(2, 0, 1))
                return torch.tensor(result)
            else:
                result = np.array(result.transpose(2, 0, 1))
                return torch.tensor(result) / 255.0
        return None


def imagehandler(imagespec, extensions=image_extensions):
    """Create an image handler.

    This is just a lower case alias for ImageHander.

    :param imagespec: textual image spec
    :param extensions: list of extensions the handler should be applied for
    """
    return ImageHandler(imagespec, extensions)


################################################################
# torch video
################################################################


def torch_video(key, data):
    """Decode video using the torchvideo library.

    :param key: file name extension
    :param data: data to be decoded
    """
    extension = re.sub(r".*[.]", "", key)
    if extension not in "mp4 ogv mjpeg avi mov h264 mpg webm wmv".split():
        return None

    import torchvision.io

    with tempfile.TemporaryDirectory() as dirname:
        fname = os.path.join(dirname, f"file.{extension}")
        with open(fname, "wb") as stream:
            stream.write(data)
        return torchvision.io.read_video(fname, pts_unit="sec")


################################################################
# torchaudio
################################################################


def torch_audio(key, data):
    """Decode audio using the torchaudio library.

    :param key: file name extension
    :param data: data to be decoded
    """
    extension = re.sub(r".*[.]", "", key)
    if extension not in ["flac", "mp3", "sox", "wav", "m4a", "ogg", "wma"]:
        return None

    import torchaudio

    with tempfile.TemporaryDirectory() as dirname:
        fname = os.path.join(dirname, f"file.{extension}")
        with open(fname, "wb") as stream:
            stream.write(data)
        return torchaudio.load(fname)


################################################################
# special class for continuing decoding
################################################################


class Continue:
    """Special class for continuing decoding.

    This is mostly used for decompression, as in:

        def decompressor(key, data):
            if key.endswith(".gz"):
                return Continue(key[:-3], decompress(data))
            return None
    """

    def __init__(self, key, data):
        """__init__.

        :param key:
        :param data:
        """
        self.key, self.data = key, data


def gzfilter(key, data):
    """Decode .gz files.

    This decodes compressed files and the continues decoding.

    :param key: file name extension
    :param data: binary data
    """
    import gzip

    if not key.endswith(".gz"):
        return None
    decompressed = gzip.open(io.BytesIO(data)).read()
    return Continue(key[:-3], decompressed)


################################################################
# decode entire training amples
################################################################


default_pre_handlers = [gzfilter]
default_post_handlers = [basichandlers]


class Decoder:
    """Decode samples using a list of handlers.

    For each key/data item, this iterates through the list of
    handlers until some handler returns something other than None.
    """

    def __init__(self, handlers, pre=None, post=None, only=None):
        """Create a Decoder.

        :param handlers: main list of handlers
        :param pre: handlers called before the main list (.gz handler by default)
        :param post: handlers called after the main list (default handlers by default)
        :param only: a list of extensions; when give, only ignores files with those extensions
        """
        if isinstance(only, str):
            only = only.split()
        self.only = only if only is None else set(only)
        if pre is None:
            pre = default_pre_handlers
        if post is None:
            post = default_post_handlers
        assert all(callable(h) for h in handlers), f"one of {handlers} not callable"
        assert all(callable(h) for h in pre), f"one of {pre} not callable"
        assert all(callable(h) for h in post), f"one of {post} not callable"
        self.handlers = pre + handlers + post

    def decode1(self, key, data):
        """Decode a single field of a sample.

        :param key: file name extension
        :param data: binary data
        """
        key = "." + key
        for f in self.handlers:
            result = f(key, data)
            if isinstance(result, Continue):
                key, data = result.key, result.data
                continue
            if result is not None:
                return result
        return data

    def decode(self, sample):
        """Decode an entire sample.

        :param sample: the sample, a dictionary of key value pairs
        """
        result = {}
        assert isinstance(sample, dict), sample
        for k, v in list(sample.items()):
            if k[0] == "_":
                if isinstance(v, bytes):
                    v = v.decode("utf-8")
                result[k] = v
                continue
            if self.only is not None and k not in self.only:
                result[k] = v
                continue
            checknotnone(v)
            assert isinstance(v, bytes)
            result[k] = self.decode1(k, v)
        return result

    def __call__(self, sample):
        """Decode an entire sample.

        :param sample: the sample
        """
        assert isinstance(sample, dict), (len(sample), sample)
        return self.decode(sample)
#   def torch_loads(data):
View Source
def torch_loads(data):
    """Load data using torch.loads, importing torch only if needed.

    :param data: data to be decoded
    """
    import io
    import torch

    stream = io.BytesIO(data)
    return torch.load(stream)

Load data using torch.loads, importing torch only if needed.

:param data: data to be decoded

#   def basichandlers(key, data):
View Source
def basichandlers(key, data):
    """Handle basic file decoding.

    This function is usually part of the post= decoders.
    This handles the following forms of decoding:

    - txt -> unicode string
    - cls cls2 class count index inx id -> int
    - json jsn -> JSON decoding
    - pyd pickle -> pickle decoding
    - pth -> torch.loads
    - ten tenbin -> fast tensor loading
    - mp messagepack msg -> messagepack decoding
    - npy -> Python NPY decoding

    :param key: file name extension
    :param data: binary data to be decoded
    """
    extension = re.sub(r".*[.]", "", key)

    if extension in "txt text transcript":
        return data.decode("utf-8")

    if extension in "cls cls2 class count index inx id".split():
        try:
            return int(data)
        except ValueError:
            return None

    if extension in "json jsn":
        return json.loads(data)

    if extension in "pyd pickle".split():
        return pickle.loads(data)

    if extension in "pth".split():
        return torch_loads(data)

    if extension in "ten tb".split():
        from . import tenbin

        return tenbin.decode_buffer(data)

    if extension in "mp msgpack msg".split():
        import msgpack

        return msgpack.unpackb(data)

    if extension in "npy".split():
        import numpy.lib.format

        stream = io.BytesIO(data)
        return numpy.lib.format.read_array(stream)

Handle basic file decoding.

This function is usually part of the post= decoders. This handles the following forms of decoding:

  • txt -> unicode string
  • cls cls2 class count index inx id -> int
  • json jsn -> JSON decoding
  • pyd pickle -> pickle decoding
  • pth -> torch.loads
  • ten tenbin -> fast tensor loading
  • mp messagepack msg -> messagepack decoding
  • npy -> Python NPY decoding

:param key: file name extension :param data: binary data to be decoded

#   def call_extension_handler(key, data, f, extensions):
View Source
def call_extension_handler(key, data, f, extensions):
    """Call the function f with the given data if the key matches the extensions.

    :param key: actual key found in the sample
    :param data: binary data
    :param f: decoder function
    :param extensions: list of matching extensions
    """
    extension = key.lower().split(".")
    for target in extensions:
        target = target.split(".")
        if len(target) > len(extension):
            continue
        if extension[-len(target):] == target:
            return f(data)
    return None

Call the function f with the given data if the key matches the extensions.

:param key: actual key found in the sample :param data: binary data :param f: decoder function :param extensions: list of matching extensions

#   def handle_extension(extensions, f):
View Source
def handle_extension(extensions, f):
    """Return a decoder function for the list of extensions.

    Extensions can be a space separated list of extensions.
    Extensions can contain dots, in which case the corresponding number
    of extension components must be present in the key given to f.
    Comparisons are case insensitive.

    Examples:
    handle_extension("jpg jpeg", my_decode_jpg)  # invoked for any file.jpg
    handle_extension("seg.jpg", special_case_jpg)  # invoked only for file.seg.jpg
    """
    extensions = extensions.lower().split()
    return partial(call_extension_handler, f=f, extensions=extensions)

Return a decoder function for the list of extensions.

Extensions can be a space separated list of extensions. Extensions can contain dots, in which case the corresponding number of extension components must be present in the key given to f. Comparisons are case insensitive.

Examples: handle_extension("jpg jpeg", my_decode_jpg) # invoked for any file.jpg handle_extension("seg.jpg", special_case_jpg) # invoked only for file.seg.jpg

#   class ImageHandler:
View Source
class ImageHandler:
    """Decode image data using the given `imagespec`.

    The `imagespec` specifies whether the image is decoded
    to numpy/torch/pi, decoded to uint8/float, and decoded
    to l/rgb/rgba:

    - l8: numpy uint8 l
    - rgb8: numpy uint8 rgb
    - rgba8: numpy uint8 rgba
    - l: numpy float l
    - rgb: numpy float rgb
    - rgba: numpy float rgba
    - torchl8: torch uint8 l
    - torchrgb8: torch uint8 rgb
    - torchrgba8: torch uint8 rgba
    - torchl: torch float l
    - torchrgb: torch float rgb
    - torch: torch float rgb
    - torchrgba: torch float rgba
    - pill: pil None l
    - pil: pil None rgb
    - pilrgb: pil None rgb
    - pilrgba: pil None rgba

    """

    def __init__(self, imagespec, extensions=image_extensions):
        """Create an image handler.

        :param imagespec: short string indicating the type of decoding
        :param extensions: list of extensions the image handler is invoked for
        """
        checkmember(imagespec, list(imagespecs.keys()), "unknown image specification")
        self.imagespec = imagespec.lower()
        self.extensions = extensions

    def __call__(self, key, data):
        """Perform image decoding.

        :param key: file name extension
        :param data: binary data
        """
        import PIL.Image

        extension = re.sub(r".*[.]", "", key)
        if extension.lower() not in self.extensions:
            return None
        imagespec = self.imagespec
        atype, etype, mode = imagespecs[imagespec]
        with io.BytesIO(data) as stream:
            img = PIL.Image.open(stream)
            img.load()
            img = img.convert(mode.upper())
        if atype == "pil":
            return img
        elif atype == "numpy":
            result = np.asarray(img)
            checkmember(result.dtype, [np.uint8])
            if etype == "uint8":
                return result
            else:
                return result.astype("f") / 255.0
        elif atype == "torch":
            import torch

            result = np.asarray(img)
            checkmember(result.dtype, [np.uint8])
            if etype == "uint8":
                result = np.array(result.transpose(2, 0, 1))
                return torch.tensor(result)
            else:
                result = np.array(result.transpose(2, 0, 1))
                return torch.tensor(result) / 255.0
        return None

Decode image data using the given imagespec.

The imagespec specifies whether the image is decoded to numpy/torch/pi, decoded to uint8/float, and decoded to l/rgb/rgba:

  • l8: numpy uint8 l
  • rgb8: numpy uint8 rgb
  • rgba8: numpy uint8 rgba
  • l: numpy float l
  • rgb: numpy float rgb
  • rgba: numpy float rgba
  • torchl8: torch uint8 l
  • torchrgb8: torch uint8 rgb
  • torchrgba8: torch uint8 rgba
  • torchl: torch float l
  • torchrgb: torch float rgb
  • torch: torch float rgb
  • torchrgba: torch float rgba
  • pill: pil None l
  • pil: pil None rgb
  • pilrgb: pil None rgb
  • pilrgba: pil None rgba
#   ImageHandler( imagespec, extensions=['jpg', 'jpeg', 'png', 'ppm', 'pgm', 'pbm', 'pnm'] )
View Source
    def __init__(self, imagespec, extensions=image_extensions):
        """Create an image handler.

        :param imagespec: short string indicating the type of decoding
        :param extensions: list of extensions the image handler is invoked for
        """
        checkmember(imagespec, list(imagespecs.keys()), "unknown image specification")
        self.imagespec = imagespec.lower()
        self.extensions = extensions

Create an image handler.

:param imagespec: short string indicating the type of decoding :param extensions: list of extensions the image handler is invoked for

#   def imagehandler( imagespec, extensions=['jpg', 'jpeg', 'png', 'ppm', 'pgm', 'pbm', 'pnm'] ):
View Source
def imagehandler(imagespec, extensions=image_extensions):
    """Create an image handler.

    This is just a lower case alias for ImageHander.

    :param imagespec: textual image spec
    :param extensions: list of extensions the handler should be applied for
    """
    return ImageHandler(imagespec, extensions)

Create an image handler.

This is just a lower case alias for ImageHander.

:param imagespec: textual image spec :param extensions: list of extensions the handler should be applied for

#   def torch_video(key, data):
View Source
def torch_video(key, data):
    """Decode video using the torchvideo library.

    :param key: file name extension
    :param data: data to be decoded
    """
    extension = re.sub(r".*[.]", "", key)
    if extension not in "mp4 ogv mjpeg avi mov h264 mpg webm wmv".split():
        return None

    import torchvision.io

    with tempfile.TemporaryDirectory() as dirname:
        fname = os.path.join(dirname, f"file.{extension}")
        with open(fname, "wb") as stream:
            stream.write(data)
        return torchvision.io.read_video(fname, pts_unit="sec")

Decode video using the torchvideo library.

:param key: file name extension :param data: data to be decoded

#   def torch_audio(key, data):
View Source
def torch_audio(key, data):
    """Decode audio using the torchaudio library.

    :param key: file name extension
    :param data: data to be decoded
    """
    extension = re.sub(r".*[.]", "", key)
    if extension not in ["flac", "mp3", "sox", "wav", "m4a", "ogg", "wma"]:
        return None

    import torchaudio

    with tempfile.TemporaryDirectory() as dirname:
        fname = os.path.join(dirname, f"file.{extension}")
        with open(fname, "wb") as stream:
            stream.write(data)
        return torchaudio.load(fname)

Decode audio using the torchaudio library.

:param key: file name extension :param data: data to be decoded

#   class Continue:
View Source
class Continue:
    """Special class for continuing decoding.

    This is mostly used for decompression, as in:

        def decompressor(key, data):
            if key.endswith(".gz"):
                return Continue(key[:-3], decompress(data))
            return None
    """

    def __init__(self, key, data):
        """__init__.

        :param key:
        :param data:
        """
        self.key, self.data = key, data

Special class for continuing decoding.

This is mostly used for decompression, as in:

def decompressor(key, data):
    if key.endswith(".gz"):
        return Continue(key[:-3], decompress(data))
    return None
#   Continue(key, data)
View Source
    def __init__(self, key, data):
        """__init__.

        :param key:
        :param data:
        """
        self.key, self.data = key, data

__init__.

:param key: :param data:

#   def gzfilter(key, data):
View Source
def gzfilter(key, data):
    """Decode .gz files.

    This decodes compressed files and the continues decoding.

    :param key: file name extension
    :param data: binary data
    """
    import gzip

    if not key.endswith(".gz"):
        return None
    decompressed = gzip.open(io.BytesIO(data)).read()
    return Continue(key[:-3], decompressed)

Decode .gz files.

This decodes compressed files and the continues decoding.

:param key: file name extension :param data: binary data

#   class Decoder:
View Source
class Decoder:
    """Decode samples using a list of handlers.

    For each key/data item, this iterates through the list of
    handlers until some handler returns something other than None.
    """

    def __init__(self, handlers, pre=None, post=None, only=None):
        """Create a Decoder.

        :param handlers: main list of handlers
        :param pre: handlers called before the main list (.gz handler by default)
        :param post: handlers called after the main list (default handlers by default)
        :param only: a list of extensions; when give, only ignores files with those extensions
        """
        if isinstance(only, str):
            only = only.split()
        self.only = only if only is None else set(only)
        if pre is None:
            pre = default_pre_handlers
        if post is None:
            post = default_post_handlers
        assert all(callable(h) for h in handlers), f"one of {handlers} not callable"
        assert all(callable(h) for h in pre), f"one of {pre} not callable"
        assert all(callable(h) for h in post), f"one of {post} not callable"
        self.handlers = pre + handlers + post

    def decode1(self, key, data):
        """Decode a single field of a sample.

        :param key: file name extension
        :param data: binary data
        """
        key = "." + key
        for f in self.handlers:
            result = f(key, data)
            if isinstance(result, Continue):
                key, data = result.key, result.data
                continue
            if result is not None:
                return result
        return data

    def decode(self, sample):
        """Decode an entire sample.

        :param sample: the sample, a dictionary of key value pairs
        """
        result = {}
        assert isinstance(sample, dict), sample
        for k, v in list(sample.items()):
            if k[0] == "_":
                if isinstance(v, bytes):
                    v = v.decode("utf-8")
                result[k] = v
                continue
            if self.only is not None and k not in self.only:
                result[k] = v
                continue
            checknotnone(v)
            assert isinstance(v, bytes)
            result[k] = self.decode1(k, v)
        return result

    def __call__(self, sample):
        """Decode an entire sample.

        :param sample: the sample
        """
        assert isinstance(sample, dict), (len(sample), sample)
        return self.decode(sample)

Decode samples using a list of handlers.

For each key/data item, this iterates through the list of handlers until some handler returns something other than None.

#   Decoder(handlers, pre=None, post=None, only=None)
View Source
    def __init__(self, handlers, pre=None, post=None, only=None):
        """Create a Decoder.

        :param handlers: main list of handlers
        :param pre: handlers called before the main list (.gz handler by default)
        :param post: handlers called after the main list (default handlers by default)
        :param only: a list of extensions; when give, only ignores files with those extensions
        """
        if isinstance(only, str):
            only = only.split()
        self.only = only if only is None else set(only)
        if pre is None:
            pre = default_pre_handlers
        if post is None:
            post = default_post_handlers
        assert all(callable(h) for h in handlers), f"one of {handlers} not callable"
        assert all(callable(h) for h in pre), f"one of {pre} not callable"
        assert all(callable(h) for h in post), f"one of {post} not callable"
        self.handlers = pre + handlers + post

Create a Decoder.

:param handlers: main list of handlers :param pre: handlers called before the main list (.gz handler by default) :param post: handlers called after the main list (default handlers by default) :param only: a list of extensions; when give, only ignores files with those extensions

#   def decode1(self, key, data):
View Source
    def decode1(self, key, data):
        """Decode a single field of a sample.

        :param key: file name extension
        :param data: binary data
        """
        key = "." + key
        for f in self.handlers:
            result = f(key, data)
            if isinstance(result, Continue):
                key, data = result.key, result.data
                continue
            if result is not None:
                return result
        return data

Decode a single field of a sample.

:param key: file name extension :param data: binary data

#   def decode(self, sample):
View Source
    def decode(self, sample):
        """Decode an entire sample.

        :param sample: the sample, a dictionary of key value pairs
        """
        result = {}
        assert isinstance(sample, dict), sample
        for k, v in list(sample.items()):
            if k[0] == "_":
                if isinstance(v, bytes):
                    v = v.decode("utf-8")
                result[k] = v
                continue
            if self.only is not None and k not in self.only:
                result[k] = v
                continue
            checknotnone(v)
            assert isinstance(v, bytes)
            result[k] = self.decode1(k, v)
        return result

Decode an entire sample.

:param sample: the sample, a dictionary of key value pairs